rs31469108 SNP Detail

Summary

• ID
  rs31469108
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:137669596 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCATCTGTC AGTTGACACT
  GCTCCCTCCC TGATTGACAG CTAGGGGAAC AGGGACCCTG GTGCTACCAC AGCAGGGAAA
  TGAAAGACAA GCAAACTAGG TAAGGAAAGG AGGAAGTGAT GCAGGGGTTC TGCGTTTCTG
  TCAAGAGCCC CAGCTGCTGC TGAAAACATC TTTAAGTCAG GCTGGCAGAA TTTGAATAGA
  K
  GCCCGGATTT TAATGTATGC AGGAACAGTG GCACGGTCAA TTTGTGTTGT TTTAAGCCAT
  GACAAATTTT TGGTGACTTG TTATATAGCA TAGAAAGTGA ATACCGAAGG GTCCATGTCT
  AAGAAGAGGA TAAACAATAT GTTAAACTCT TTGCTTTTGA GCTCACTGAA GCCTGTCAAC
  AGTTGTTTAG AGAAGTACCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45536589	mCV27576168	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G	G
ss135945668	ENSMUSSNP4608130	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T		G
ss320977311	CHEV_3_137626799	CHEVERUD	SCREENING_POP	f	SNP						T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31469108					SNP	G	G	T	G	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:137669596 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dapp1	dual adaptor for phosphotyrosine and 3-phosphoinositides 1			Intron
				Noncoding-Transcript-Variant
Rr586037	regulatory region 586037			1506 bp distal
Rr586038	regulatory region 586038			within coordinates