AGTTC AGGGATTGTA GGCATGTGCA A TCATGCCTGG TTTAAATCTA CCCTT A = A Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | A/J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|
ss134784728 | ENSMUSSNP5290240 | ENSEMBL | ENSEMBL_Sanger | r | SNP | T | T | ||
ss320703478 | CHEV_3_36510403 | CHEVERUD | SCREENING_POP | r | SNP | T | T | ||
SNP Consensus Information | |||||||||
SNP | Consensus Type | A/J |
DBA/2J |
LG/J |
SM/J |
||||
rs3146876 | SNP | A | A | A | A |
Location: Chr3:36665630 () rs orientation: reverse | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Bbs7 | Bardet-Biedl syndrome 7 | Intron | ||||||
Cpgi13088 | CpG island 13088 | 1615 bp proximal | ||||||
Rr575383 | regulatory region 575383 | 1140 bp proximal | ||||||
Rr575384 | regulatory region 575384 | 1794 bp proximal | ||||||
Rr575385 | regulatory region 575385 | 1947 bp proximal | ||||||
Tssr33039 | transcription start site region 33039 | 1858 bp downstream | ||||||
Tssr33040 | transcription start site region 33040 | 1889 bp downstream | ||||||
Tssr33041 | transcription start site region 33041 | 1937 bp downstream | ||||||
Tssr33042 | transcription start site region 33042 | 1980 bp downstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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