rs3146793 SNP Detail

Summary

• ID
  rs3146793
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:37432105 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCC GTAGTCTGAG AGCATCTGTC
  R
  CAAGAGCTGT AACACTGCCT GGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45525427	mCV24331089	ABI	CRAMUS_MOUSE	f	SNP	A	G	A
ss134804146	ENSMUSSNP5432273	ENSEMBL	ENSEMBL_Sanger	f	SNP	A		A
ss320709673	CHEV_3_37276878	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3146793					SNP	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37432105 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fgf2	fibroblast growth factor 2			Intron
				Noncoding-Transcript-Variant
Gm43439	predicted gene 43439			within coordinates
Rr575470	regulatory region 575470			82 bp proximal
Rr575471	regulatory region 575471			1438 bp proximal