rs31467325 SNP Detail

Summary

• ID
  rs31467325
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19402437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGTACCCCC ATGCACCCAT
  TGTCCAACAA TAGTTACTAA AATATGTGAG ATCACTTATT TTAAGTCTTC TTCTTCTTCT
  TCTTCTTTTT TTTTTTGATT TTTCAAGACA GGGTTTCTCT GGGTAGCCCT AGCTGTCCTG
  GAACTCACTC TGTAGAACAG GCTGGCCTCG AACTCAGAAA TCTGCCTGCC TCTGCCTCCC
  R
  AGTGCTGGGA TTACTCAGAG GCACTCAAAT TATTTTATCT TTTGCATATT ACTTTCTTGA
  CAACAGGTAA GTATATTTTT ATGCTGTAGT TTCAGATCCT CTTTCTTAAA GTAGTAACAT
  TTGAAAGCTG TTTCTTTCCA AAGCCTCTAC TGCCGTTTCC CTCATTAGCT GACTTTTAAC
  TAAATCTGTG CACATACAGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss45536479	mCV25299779	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss134667143	ENSMUSSNP5011003	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31467325					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19402437 () rs orientation: forward

Symbol	Name	Function Class
Gm52602	predicted gene, 52602	667 bp downstream
Rr397615	regulatory region 397615	1769 bp upstream
Rr573976	regulatory region 573976	within coordinates
Rr573977	regulatory region 573977	1616 bp proximal
Rr573978	regulatory region 573978	1881 bp proximal