rs3146361 SNP Detail

Summary

• ID
  rs3146361
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36914827 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TATGT GATGTTTGAC CGAACTGTGA
  R
  TGAAGTTAAC CCTTTCCTCC CCAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45467067	mCV23082260	ABI	CRAMUS_MOUSE	r	SNP	C	C	T	C
ss134792443	ENSMUSSNP6135600	ENSEMBL	ENSEMBL_Sanger	r	SNP	C	C		C
ss320705816	CHEV_3_36759600	CHEVERUD	SCREENING_POP	r	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3146361					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36914827 () rs orientation: reverse

Symbol	Name	Function Class
Rr374830	regulatory region 374830	1465 bp downstream
Rr575409	regulatory region 575409	815 bp proximal
Rr575410	regulatory region 575410	1938 bp proximal
Tssr28876	transcription start site region 28876	1317 bp upstream
Tssr28877	transcription start site region 28877	1336 bp upstream