rs3146359 SNP Detail

Summary

• ID
  rs3146359
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:36915022 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTATA GAACCAAGAC TACCAGCCCA
  R
  AGATGGTCCC ACCCACAAGG GGCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45480083	mCV23082262	ABI	CRAMUS_MOUSE	r	SNP	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3146359					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36915022 () rs orientation: reverse

Symbol	Name	Function Class
Cpgi13092	CpG island 13092	1910 bp proximal
Rr374830	regulatory region 374830	1660 bp downstream
Rr575409	regulatory region 575409	620 bp proximal
Rr575410	regulatory region 575410	1743 bp proximal
Tssr28876	transcription start site region 28876	1122 bp upstream
Tssr28877	transcription start site region 28877	1141 bp upstream