rs31461294 SNP Detail

Summary

• ID
  rs31461294
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:131741960 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACAATACGA AAGCAATAAA
  AATTAAAACA GTATTCCAAA CATACAAATA TAGCTAATAA GGCCATATAA AAAGGAAAAA
  AAGACAGATG AAATAGAACT TGAGGTTATC ATTATCTTGG GTTAGTGTAG TAATGGTAAA
  TAGGTTATAT TTAGCTCATG ACTTTTATTT GAGTGATGGA TTTTAATGTG CTGGTGTGTG
  W
  GTGTGTGTGT GTGTGTGTGT GTTACACATC AACCTCTGGA GTTGTTCCTC CAGTGTTACC
  ATTCTTAGTT TTGCAGCAGG GTCTTTTCCT GGTGTATTAG CCTTAGGTGA GCTTGCCAGT
  GCACACCAAG GTCCTGCCTG TCTCTGTCTC CCTAGTGTTA GGCTTACAGG TGTGAATACA
  AAGCCTTGTT TGTTATATAG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45536507	mCV23621036	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31461294					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131741960 () rs orientation: forward

Symbol	Name	Function Class
Gm29949	predicted gene, 29949	within coordinates
Gm64577	predicted gene, 64577	within coordinates
Rr585407	regulatory region 585407	1471 bp proximal