rs31461176 SNP Detail

Summary

• ID
  rs31461176
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143889448 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGATAAAGT GTATTGCTGT
  TAGAAACTGA CAACCTGTGT CCAGAGTTTA GACAGAAAAT GGGACATCAC AGTGCTGGAG
  ACAGGAGTGG AAAGAGTGCA CGTATCCATC CTGTACATAA CTTTTATGTA TTTTTAAAAA
  GATGTATTTA TTTATATTTA TATGCATACA CTGTAGCTGT CTTCAGACAC ATCAGAAGAA
  K
  GCATCGGACC CCATTACAGA TGGTTGTGAG CCACCATGTG GTCGCTGGGA ATTGAACTCA
  GGACCTCTGG AAGAGCAGTC AGTGCTCTTA ACTGCTGAGC CATCTCTCCA GCCCACTTTT
  AAACTGTGTG TGCGCGCACA TGTGTGTGTG TCTGTGTGTC TTTGTGTGTG TGTGTCTGTC
  TGTCTGTCTT TCTGCCTGTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45536310	mCV23166018	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	T
ss136029133	ENSMUSSNP915379	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31461176					SNP	G	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143889448 () rs orientation: forward

Symbol	Name	Function Class
Rr586593	regulatory region 586593	1249 bp distal
Rr586594	regulatory region 586594	1838 bp proximal