rs31445009 SNP Detail

Summary

• ID
  rs31445009
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:125101430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATTACAATA ATTTAAACAT
  TCAAACATTC TTTAAATTTC ATTAAATAAA ATAATAGGCC TGAAACAGAC TTCCTCTGCC
  ATCACAAAGC TACTTGTTTT GAATTTTTCT CCTTTCAATT TGTTTCTATA GAATAATTGG
  TGTTGGAGTG CTTGCCCATA TTTTCTATTT TAACTGATAA CATAAAAACT TATAAAGATG
  Y
  CTTGGTTTCT TTATATTTTA CTTTGGTTTG CAGTAATACA GTTCTGATAA CCAAGGGTTA
  TATGTGGTGT GAGAATGAAT TTAGTTATGT GTTGGTCAGA CATGCCTGAA CAAAGGTCTC
  TGAAAGCATG ATAATAGGTG TCTCTGAAAT GTGACCATCC ACAGTCATTC AGCTGAGTTA
  AGGACATGTG CTGTGCTATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45535790	mCV24036422	ABI	CRAMUS_MOUSE	f	SNP	T	C
ss320935452	CHEV_3_125010699	CHEVERUD	SCREENING_POP	f	SNP			C	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs31445009					SNP	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:125101430 () rs orientation: forward

Symbol	Name	Function Class
Rr584607	regulatory region 584607	723 bp distal