rs31440794 SNP Detail

Summary

• ID
  rs31440794
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151556935 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGCACTTGG TCACAGACTA
  ATAACTGTGG GTGAGACCTG TGGGCTGCCC TGGTGAGGGT TCGCAAGTGA ATCTGTAAAG
  AACTCCAAGT TTGTTTTGAA CATCATTACC AACAGCAGCT TTTGGATTGA TTCTTGTTTG
  GTGCTCCAGT ATAAACATTC GACAACACAC CAGTCACATA TAGCCAAACT TCCTTACTTA
  Y
  GGTACTATCT AGTACTGATT CAGCTGAAAT GACCAGAGTT TCACTAGAAT TAGAGGCATA
  AAGCCAAAGG ATGTGGACAG AAGCAAGCAC CTAGTGCCTC AAGGAATAAG CAGCTGTGTT
  TACCAACATA CACCACAAAC TGGCCAAGAA CAGTGATCCC ACATAGCTGA GTCCATAGCA
  GACAATATGT GTGGGCTGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45535056	mCV24029253	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss136099236	ENSMUSSNP4273778	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss321027286	CHEV_3_151514262	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31440794					SNP	T	C	C	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151556935 () rs orientation: forward

Symbol	Name	Function Class
Gm31596	predicted gene, 31596	within coordinates
Rr587424	regulatory region 587424	127 bp proximal