rs31440596 SNP Detail

Summary

• ID
  rs31440596
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:104194626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGAACTAA AATCCAGTGC
  AAGGGCCCTA ACGTGGGCCT TTGTTTGTTT GGAAAGCACT GAGAAGTCTT CATGGCTAAA
  GAGTAGCAGG AATTGAGGTC AGAGAAACTA AACAGGGTTT GGTGGCACAG AGGCCAAGGT
  AAGCCACTTG GTTTATTCTG AACGTTAGGC AAAGATACGA TTGGAGAATG ATACGATTGG
  K
  TTTATACTTT ATAAGAAAGA CTCAAGAGGT GAGGGTGGGC TGCCACATGG AACCATTTGG
  TAGAAAGGGC AAGGCAGAAC CAGAGAGATG CTTCGGCCAT GGTCCACGCT GAAAATGGTG
  GTGGTAGCAA GATAAGAATT TCAAGAAATC ACTGTGTAGA CATACAAGAA AAGCTGTCCA
  GATACAGGAC GACCTGACTC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45535651	mCV24645022	ABI	CRAMUS_MOUSE	f	SNP	T	G	G	G
ss135566935	ENSMUSSNP2851094	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31440596					SNP	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:104194626 () rs orientation: forward

Symbol	Name	Function Class
Rr582481	regulatory region 582481	781 bp proximal
Rr582482	regulatory region 582482	1762 bp proximal