rs31438914 SNP Detail

Summary

• ID
  rs31438914
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:31029529 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTAAAAAAA GGAAAGAAAA
  TACTGACGAG GAAGAAAGGC AGCATGTGTT GGACTCCTAT TGAGTACTCT ACCTGGGCCA
  TCCCATCTAA TGTACACAGC AGGTCATGAC GTAGATCTTA GTCTTCATCT GGAAGAGGAG
  GGTAGTCACA ATAGTAAGAT TAAGTCCCCT GAACAAGGCC ACACAGTTAC TCAATGGCAG
  K
  ACTGGCATGC GTGGTTTTTC TTTAAAATTT ATTTTATTAA TTATTTGTGT GTGAGCTCAC
  AGATGCTATA GACTGCGTGT GGAGGTCAGA GGTTAACCCC CAGCAGTCAG TTCTCTTCTT
  CCACTATGGG GTCCAGGGGT CAGACTTAGG CCTTGACCCA CTGAGCCTGC TCACCCGTGC
  TCCAACACAG GTTGACCCAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45534283	mCV22531233	ABI	CRAMUS_MOUSE	f	SNP	G	G	T
ss134734234	ENSMUSSNP3919753	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss320694249	CHEV_3_30874302	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31438914					SNP	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:31029529 () rs orientation: forward

Symbol	Name	Function Class
Gm2979	predicted gene 2979	269 bp downstream
Rr574844	regulatory region 574844	within coordinates
Rr574845	regulatory region 574845	200 bp proximal
Rr574846	regulatory region 574846	1594 bp proximal