rs31438741 SNP Detail

Summary

• ID
  rs31438741
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57878481 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GGCTGCCGCT GCCTCTGCCT CCTGAGTGCT AGGATTAAAA GTGTGCACCA CCACTGCCTG
  GCCATGAGAG GGGTTGGAAA TATTCAGCAT TACCTCAGAA CCATAGACTT CCAAAGATGA
  AAGGGTCTTT GAAAGTTGGC TAGCAAACTT TATATGCCCC AGTACAGGGG AATACCAGGG
  CCAAAAAGGG GGAGTGGGTG GGCAGGGGAG TGGGGGTGGG TGGATATGGG GGACTTTTGG
  TATAGCATTG GAAATGTAAA TGAGTTAAAT ACCTAATAAA AAATGGAAAA AAAAAAAAAA
  R
  AAAAAAAAAA AAAAAAAGAA AGTTGGCTAG CATGCTCTAC TCTTGGTATG CACTATTCAC
  ATCTCTGAGA GCAGGCGAGA TGCCTGCTTT AAAGTTCTTC AGGCCCTATA GCAGATATCA
  AACCCTGAAC ACACGGCAGT GATATTTCCA GGGGAAGTTC CCTCGTGTCC CACTTGAGGC
  TAATACACTA TTGTCTGCTG GAACTTAGGG CCCTGCTTGT GGCCAGGAAG TGGACTTCTT
  TGGTTTGTCT CTCACACACC TACCACCTAT GTGTGAGTTA GAACCTAGTT GTGAGTTAAG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J
ss45535136	mCV22832849	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss135205254	ENSMUSSNP1698296	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J
rs31438741					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57878481 () rs orientation: forward

Symbol	Name	Function Class
Gm32753	predicted gene, 32753	within coordinates
Rr577179	regulatory region 577179	1444 bp proximal