rs31435584 SNP Detail

Summary

• ID
  rs31435584
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:144386911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACCCCAAAG CTGGGGAAGC AGAAGCAAGT CCTATGGCTA
  AGTTACCAGC AAGCCTAGCT ACTTGTAAGT CCCTGTATCA AATAAGTGGG CAGTTCCTAC
  Y
  GAATGACACA CCCAACATTG TCCTCTTGTC CCGGTGAGCA CTTGCATACA TATGCACACA
  CAGGAAAAAT AAAATAAAAA GGAGGCATAC AGAAGTCAA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45533850	mCV23565887	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	T
ss321006261	CHEV_3_144344114	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31435584					SNP	C	C	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:144386911 () rs orientation: forward

Symbol	Name	Function Class
Rr586705	regulatory region 586705	208 bp proximal
Rr586706	regulatory region 586706	1024 bp proximal
Rr586707	regulatory region 586707	1670 bp proximal