rs31429865 SNP Detail

Summary

• ID
  rs31429865
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:17977711 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATGAAGA CCAATCTACA
  CATCTGCTAC ATATGTGGAG GGATCCTAGG TCCAGTCCAT GCTCACTCTT TGGATGGTGG
  TTCAGTCTCT GAGAGCCCCT AAGGGTCAGG TTAGTTGACT CTGTTGGTCT TTCTGTGGAG
  AAAGGAAAAG GGACAACATG GTTGTGTGTC CTCAGAAGTC TCTGCTGAGA CCCACCTTCA
  Y
  ATCCCTGGAT GACCAACTGG TGTTCCATCT CATGTCTCTG TCCCTCCACA CACTTATCTC
  CCTCCTGCTC TCCCTCTCTG GGGAAAGGAT ACTCCTTACC ACTGAAGTCA CTCTATCAGA
  TCGATTTTAT CTAGATCATT TTAGGCAATG GATTTGTAGG TCACACAGAA TCTGATATGG
  GTTGATAGTG CTATTTTTAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46032396	mCV25039047	ABI	CRAMUS_MOUSE	f	SNP	T	C	C
ss148438433	ENSMUSSNP6161117	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs31429865					SNP	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:17977711 () rs orientation: forward

Symbol	Name	Function Class
Mill1	MHC I like leukocyte 1	1561 bp upstream
Rr642879	regulatory region 642879	361 bp proximal
Tssr64734	transcription start site region 64734	1416 bp upstream
Tssr64735	transcription start site region 64735	1449 bp upstream
Tssr64736	transcription start site region 64736	1599 bp upstream