rs31427428 SNP Detail

Summary

• ID
  rs31427428
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151771776 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAGGTGAGG GTTGGAAGTG
  GGGAGATATC AGATGTAGGC CAGCTGTCTG CTGGGTCTTT TCAGCAGCTG CTACTCCAGA
  GGAGCCCGCT GAGAAGTTGA AAAGGCTCCA GGGGAGAGTA TCTCTTGCCC AAAGTGTTAC
  AGCTCTATAC AGCAGACACT CAGACAGTCC TTGACAAAAT AACGAGTACT TTATTCCTGT
  S
  GACAGGGTCT TATATACACT TTGGGGTGGA TTGGGGTCTA AGAGCAGATG CTTTCTGTTG
  GCTTACCCCG AGATGTTAAG GATGCCTCAT CTGCCTGTGC ATGGTCACCG TCCTCTCCGT
  GGGGTGTCAC AGTCATGTGT TCTAGCACAG AAATCTGGTC CAGAGTAGAT GAAACACCTA
  CCATATGCAG GTATGAGGGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45533114	mCV24211758	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	C	C
ss136100475	ENSMUSSNP123748	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		C
ss321027904	CHEV_3_151729103	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31427428					SNP	G	G	G	C	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151771776 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	within coordinates
Rr587440	regulatory region 587440	599 bp proximal
Rr587441	regulatory region 587441	706 bp proximal