rs3142184 SNP Detail

Summary

• ID
  rs3142184
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  105
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89012241 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        CCTCT TCTCTCCTCC TCCCTCCTCT
  Y
  CTCCCTCCCT TCCTCCCTGC CCTCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321851086	CHEV_6_88985253	CHEVERUD	SCREENING_POP	r	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs3142184					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89012241 () rs orientation: reverse

Symbol	Name	Function Class
Gm66902	predicted gene, 66902	within coordinates
Rr1306	regulatory region 1306	within coordinates
Rr634069	regulatory region 634069	1148 bp distal
Rr634070	regulatory region 634070	within coordinates