rs31421685 SNP Detail

Summary

• ID
  rs31421685
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124034688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGTTGGC CATCATTGGG
  AAGAGAGGCC CCTTGGTCTT GCAAACTTTA TATGCCCTGG TACAGGGGAA CACCAGGGCC
  AAGAAGTGGG AGTGGGTGGG TAGGAAAGAG GGGAGGGGGG AGGGTATGGG GGACTTTTAG
  GATAGCATTT GAAATGTAAA TGAAGAATAT ACCGAATAAA AATTGGAAAA ATAAATAAAG
  S
  CATGTATTAC CTCCTTTGGA ATGGTCCTTA AACCAATCAC AAAGCAGATG GTATCCAGAG
  ACTATTCCTG CCACTGTTGC ACTCACGGTT ATCTCTTACC CCACTGGTCT TTATTATAGT
  CCACAGTGTC CTTTTCCCCC AACAACCTTC ATAGCAACTT AATGTACTAT GAAAGCTATC
  AAACATGGAG AAAGCTTCTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss45531598	mCV25439150	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss135782964	ENSMUSSNP3360775	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss320926574	CHEV_3_123943957	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs31421685					SNP	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124034688 () rs orientation: forward

Symbol	Name	Function Class
Rr584580	regulatory region 584580	407 bp proximal