rs31420970 SNP Detail

Summary

• ID
  rs31420970
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165916588 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGCTTTGT TCGGGAACTG TCTCTTTTGA ATGGCCAGGC
  CGCCAGCAGC CCTGCAGTTA GAGTCTAGAT TTCTCTGTAA TTGCTGTCTT AATCCCTCCC
  Y
  GGGCTTAGAT TCTTAAAAGG GCAAAATGGT ACAGTACAGA AAGTGGTTTT AAAATTAGAC
  ATATCTAATT GTAAAGTCCG AGGCTCTGGT CTTTGGTTT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45031890	mCV22723401	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31420970					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165916588 () rs orientation: forward

Symbol	Name	Function Class
Rr422527	regulatory region 422527	35 bp distal
Rr422528	regulatory region 422528	702 bp proximal