rs31420021 SNP Detail

Summary

• ID
  rs31420021
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:161627892 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAATG ACAATAACAA AATTTAGAAA
  R
  GAAATGGACT ACACTGGAAA GAGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45030997	mCV24536342	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	G
ss145922762	ENSMUSSNP2224312	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs31420021					SNP	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:161627892 () rs orientation: forward

Symbol	Name	Function Class
Rr421849	regulatory region 421849	1057 bp distal
Rr421850	regulatory region 421850	216 bp distal
Rr421851	regulatory region 421851	1071 bp proximal