rs31408065 SNP Detail

Summary

• ID
  rs31408065
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57881200 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCACTAGA GCATGGACCT
  GGGTGTTTCT CTCTTCAGGG AATTTCTCTC TCACATCCAC AGGTCCTGGC CAGGGTCATC
  TTTCAGAGAG GATTCCACCC ACTGGGCAGA GCAAGTTGCA ACACCAGGGG CCTCCTTTGC
  CTTGTGCCAT TTTCTTTATG CGCCTTTTTT TGTCCCCCTC TGAAAATGTC TTTTCATGCT
  Y
  TGATTTTGTT TCCATATCTT CGTATCTTGT TTGCCTGCCT GCCTCCAGGC AGTGCGTCAA
  TCCAGACAGA ACAGGAATTT AGCTGTGGTT CAAACAGTGC TGCCATTGCT TGTAACAGTA
  CCTGGGATCT GGGTGGTGGT GGTCAGTAGC TAGATTTTGA AGTACCAGGC TAAAATAATG
  ATCAAATGGG GTTGAAACGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45530899	mCV24603854	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31408065					SNP	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57881200 () rs orientation: forward

Symbol	Name	Function Class
Gm32753	predicted gene, 32753	within coordinates
Rr577179	regulatory region 577179	796 bp distal