rs31385947 SNP Detail

Summary

• ID
  rs31385947
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67336574 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGAG ACTGTATGAG GAGGTTTGGG
  R
  AAGACTAGAA GCTCTGTTTT AGATA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45528260	mCV23634975	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss135257632	ENSMUSSNP2033753	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31385947					SNP	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67336574 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13245	CpG island 13245	705 bp proximal
Gfm1	G elongation factor, mitochondrial 1	874 bp upstream
Rr577916	regulatory region 577916	249 bp proximal
Rr577917	regulatory region 577917	365 bp proximal
Rr577918	regulatory region 577918	786 bp proximal
Tssr29439	transcription start site region 29439	860 bp upstream