rs31385451 SNP Detail

Summary

• ID
  rs31385451
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:90568135 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATA AACTATGGGC TGATTACTGG
  W
  TAGAAACTTG TGATATAACA TTGAG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45528075	mCV24984117	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T
ss135478365	ENSMUSSNP2513874	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	A		T
ss320838519	CHEV_3_90464750	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31385451					SNP	T	A	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:90568135 () rs orientation: forward

Symbol	Name	Function Class
Tssr946	transcription start site region 946	838 bp downstream
Tssr30264	transcription start site region 30264	1168 bp downstream
Tssr34247	transcription start site region 34247	1392 bp upstream
Tssr34248	transcription start site region 34248	1380 bp upstream