rs31383096 SNP Detail

Summary

• ID
  rs31383096
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:132407429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACATGAATGC ATTTTTGACA TACAAATCTA ATATTACGTC AATTTATAAA AGCACACTAT
  GAAAAGTAGA ACGAGTCTTC TGTATTCAAC TGTCTCAAAA TTGGTTTAAT GAAAACAGTC
  ACTGTAATCA TTTGATTCCA ATTCCATGAG CAGTCTGTGT TGAAATACAG TGCAGCTGAG
  GACCTCTAGT GTCACTGCTG AATATGGCAT TAATTTGTAA AGATACTGTA AAGGTGTTTG
  TGTGTGTATG TTTGTGTGTG TGTGTTTGTG TGTGTGTGTT TGTGTGTGTG TGTGTGTGTG
  W
  GTGAGAGAGA GAGAGAGAGA GAGCGCAAGA ATAAAAAGAA GAGCTAAAGT TAGCTTATAG
  AACCAAATGA GATGCTTAAA TGAAGTTTTT TTCACTTAGA ATTTTTGAGC ATTTTAATTA
  AAATATATTT ATACATCACT TCCTACCTTT CCTTTCTTCC TTTCAGCCCC TACCATACCC
  CCTACTATAA AATTGATAGC CTCTTTAAAA AATTATTATT GTTACATATA AATATATGCA
  CAATATGTAA ATCCAACCTG CTGAGTGTAC TCTTGTTATG TGTGCATATA CGATTTCAGG
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45528138	mCV22641135	ABI	CRAMUS_MOUSE	f	SNP	T	A	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31383096					SNP	T	A	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132407429 () rs orientation: forward

Symbol	Name	Function Class
Rr585446	regulatory region 585446	3 bp distal
Tbck	TBC1 domain containing kinase	within coordinates