rs31382069 SNP Detail

Summary

• ID
  rs31382069
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135391038 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAAAGTAC CCAAGAGCTG
  AAGGGGTCTG AAACCCTATA GGTGGAACAA CAATGTGAAC TAACCAGTAC CTCTCGTGTC
  TCTAGCTGCA TATGTAGCAG AACATGGCCT AGTCGGCCAT CATTGGGAAG AGAGGCCCCT
  TGGTCTTGCA AACTTTATAT GTCCCAGTAC AGAGGAACGC CAGGGCCAAG AAGTGGGGTT
  K
  GGTGGGGAAG GGAGCAGGGT GGGGCGAGGG CATAGGGATA GCATTTGAAA TGTAAATGAA
  GAAAATACCT AATAAAAAAT GGAAATGAAA AAAAACCCAC GAGGTAGAAA TTTGTATTAA
  CATATCTGGA AGAGTCACTA TCTCAGTCCT AAATTTCCTG TCTTTGAGGA CATATTTTCT
  AAAACAATTC AGCCATTTAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45528130	mCV25339486	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
ss135928485	ENSMUSSNP5589705	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31382069					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135391038 () rs orientation: forward

Symbol	Name	Function Class
Nfkb1	nuclear factor of kappa light polypeptide gene enhancer in B cells 1, p105	Intron
Rr585765	regulatory region 585765	1197 bp proximal