rs31381154 SNP Detail

Summary

• ID
  rs31381154
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  128
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:75636380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AGATTCTCTC TTCCATCTTT TGTATTCTGT TGCTGATGCT GGCATCTATG GTTCCAGATT
  TCTTTCCTAG GGTTTCTATC TCCAGCGTTG CCTCACTTTG GGTTTTCTTT ATTGTGTCTA
  CTTCCCTTTT TATGTTTTGG ATGGTTTTAT TCAATTCCAT TACCTGTTTG GTAGTGTTTT
  TCCTACAATT CTTTAAGGAA CTTTTGTGTT TCCTTTTTTA GGTCTTCTAC CTGTTTAGCT
  GTGTTTTCCT GTATTTCTTT AAGTGAGTTA TTAAAGTCCT TCTTGATGTC CTCTACCATC
  R
  TCATGAGATA TGCTTTTAAA TCAGGTCTAG CTTTTTGGGT GTGTTGGGGT ACCTAGGACT
  AGGTGCGGTG GGAGTACTGC ATTCTGATGA TGGTGAGTGG TCTTGATTTC TGTTAGTAGG
  ATTCTTACGT TTGCCTTTTG CCATCTGGTA ATCTCTGAAG CTAGTTGTGA TAGTTGTCTC
  TGGTTAGAGC TTGTTCCTCA GGTGATTAAG TTAGCCTCTA TCAGCAGGCC TGGGAAACTA
  GATCTCTCCT TAGTTTCAGT GGTCAGAGTA CTCTCTGCAG GCAAGCTGTC CTCTTGCAGG
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45528013	mCV24644486	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31381154					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:75636380 () rs orientation: forward

Symbol	Name	Function Class
Rr578361	regulatory region 578361	1945 bp proximal