rs31379765 SNP Detail

Summary

• ID
  rs31379765
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:78855980 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCACG ACGGCAGAGG CCTGTCATCT
  Y
  AGCACATAGG AGGCTGACGC AGGAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45527520	mCV24564884	ABI	CRAMUS_MOUSE	f	SNP	T	T	C
ss320809323	CHEV_3_78752595	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31379765					SNP	T	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:78855980 () rs orientation: forward

Symbol	Name	Function Class
Gm65474	predicted gene, 65474	within coordinates
Rr578444	regulatory region 578444	417 bp distal
Rr578445	regulatory region 578445	13 bp distal
Rr578446	regulatory region 578446	227 bp distal
Rr578447	regulatory region 578447	838 bp proximal
Rr578448	regulatory region 578448	928 bp proximal