rs31378472 SNP Detail

Summary

• ID
  rs31378472
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:158977380 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACCACCCCC CCCAACCACC ACCCCCCCAC CCCCCCCACC
  CCACCCCCCG CCAGTCCATC CTTGGTGCTT TGTTGCCATG CTGTCAGCAC TTGGTCGCCA
  K
  GCTGTTGCTT ATTCAGGAAT GTCTCAGGAA GACAGGTTCA GCCTCTCTTC AGGTAGCAGA
  ATCTCAGGTC AGCTGACACT TCAAAAGAAG CCAGCCAAG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45025451	mCV22735701	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss145858871	ENSMUSSNP5070889	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs31378472					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:158977380 () rs orientation: forward

Symbol	Name	Function Class
4930562F17Rik	RIKEN cDNA 4930562F17 gene	within coordinates
Rr421502	regulatory region 421502	932 bp distal