rs31375168 SNP Detail

Summary

• ID
  rs31375168
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:152062377 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCGGGACAA ATAACCTCTT
  GCTAGATAGG TCATAGACTG GGAGGGAGAA CCTGCCATCT GCTAAAGGAC ATAGTCTTAA
  ACTGACTCGT AATAACTAAA GTGTTACACC CATAGATTGA TATACCTCTT TTTTTGTTTG
  TTTGGTTGGT TGGTTTTGAG ATAAAGATTC TTTGTGTAGC CCTGGTGGTC CTGTAATTCA
  Y
  TCTGCAGACC AGGTGGGCCT TGAATTCATA GAGTTCTGCT CCTGAGTGCT GGGATTAAAG
  GGTGTGTCCC CACCACCAGG CTGATGATGG GTCTCTTAAT CCTCATCAGA GAAGCTTTCA
  TTTCTAGGAT ACCCACACTG TTAAAGGGAT GGAGAATACG GGAGTGCAGA GTGCTCTGCC
  CACATCGGGT GTCTGTATCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45527300	mCV25311382	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31375168					SNP	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:152062377 () rs orientation: forward

Symbol	Name	Function Class
Rr587538	regulatory region 587538	724 bp distal
Rr587539	regulatory region 587539	93 bp proximal
Usp33	ubiquitin specific peptidase 33	Intron