rs31372347 SNP Detail

Summary

• ID
  rs31372347
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87071821 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGGA TGAGTGATGT CCCCAGGTGT
  K
  TGTAGGGAGA GAGGCGCATC AAGGC                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45526492	mCV24904771	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss135454891	ENSMUSSNP5651668	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss320831189	CHEV_3_86968436	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31372347					SNP	G	G	T	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87071821 () rs orientation: forward

Symbol	Name	Function Class
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr2003	regulatory region 2003	358 bp proximal
Rr579450	regulatory region 579450	760 bp distal
Rr579451	regulatory region 579451	77 bp distal
Rr579452	regulatory region 579452	611 bp proximal