rs31348382 SNP Detail

Summary

• ID
  rs31348382
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117158391 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGAGG ATGAAGCACA GAAACCAGTT
  W
  TCTGCATATT GTGCTTGCCT CAGGC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
ss45525630	mCV22962702	ABI	CRAMUS_MOUSE	f	SNP	T	A		A
ss51012374	NES13913489	PERLEGEN	MM_PANEL2	f	SNP			A		T		A	T	A
ss135688374	ENSMUSSNP5375202	ENSEMBL	ENSEMBL_Sanger	f	SNP		A		A
ss320898994	CHEV_3_117067660	CHEVERUD	SCREENING_POP	f	SNP						A				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
rs31348382					SNP	T	A	A	A	T	A	A	T	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51012374	NES13913489	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117158391 () rs orientation: forward

Symbol	Name	Function Class
Rr583842	regulatory region 583842	1514 bp proximal