rs31346167 SNP Detail

Summary

• ID
  rs31346167
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153441699 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCCAGCCTTT CCTAATGAGC CCCCTGAATT GTACTTCGGT GTTAAACAAG ATGGGACTGG
  CTGGGTCCAT CTTGGAATAA CGAAAATCTT ATCGGGGGAG GAATTTTGTG GCTTCTTTAG
  AACACAGCCC CCGGGGCTCT GACCATGCCA GCATCCCCCT CTGCCTAACC TGAAATTCCT
  CTTACTGCAA ATTAAAGCCC TTCTGTTACA CATGACTCAT TCTCCACTCT CTCATCAGCC
  CCACATCCCA CTTGAATGTG CCACCCTCTC TCAGCATGGC CCCTGTAAAT CAGTGTACTG
  Y
  GTTCCGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TCTGGCACTG AGTTCTGATG TGAGCCACCC AATAACTACT CTCCATCCCC TTTGGGGTGA
  GCATCTTCCT TCTCTCAGGC AGCTCTCATC TGCAGCCGTA GGGACAGAGT GACTTCACTG
  AACGTGTGTG ATGTGTTGTG GGGTCAGCTG AAGGGCAGTT TCTAGGAAGC AGGTCTATTC
  AAAAGACAAG CCAATGTTGG CATCGACTGG GGACACGCTA AAATGCATCT GAGAGGGAAC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45524759	mCV23504367	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss136111957	ENSMUSSNP6400154	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31346167					SNP	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153441699 () rs orientation: forward

Symbol	Name	Function Class
Rr587744	regulatory region 587744	1618 bp distal
Rr587745	regulatory region 587745	768 bp proximal