rs31345186 SNP Detail

Summary

• ID
  rs31345186
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:32561774 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  CTGTCTCAAA AAAAAAAAAA AAAAAAAATG AAGCCTACAT TTCTTTGTGG TCAACTTGAC
  TATATCTGGA ATGGACTACA ATGCAGACAT GGATTTCAGA TCCTGAGGCT GGTATACACA
  AGCTTTTGAC CCAGAGTTTG AGGCTGGAAG ACACACACCT TTAATCCAGA TCTTGAGGCA
  CATCTTTAAT CTGGGCCACT CCTTCTGCTG GAGGCCTACA TACCAGAAGA AGGAAGTCAC
  CTTCTTCTTT ACCTGCTTGC ATTCACTTTG CCAGCACATC CATTGGAGCC TACTTCTTCA
  R
  AATTACAGTT TCTACAAAGG CCAGCTGAAA CACCCAGACT CATGAGGCTG AGCCACTACT
  AGGTTCTAGA ACTTCCCATT CATAGCTGGC CATTGTTGGA GTGCAGCCTG CACACACACA
  CACACACACA CACACACTGT GTGTGTGTGT GTGTGTGTAT TCATATTCCA CAAATTCCGT
  TATTCTAGAG AACACTAATA CAACCTCTGC CTCTTAAGTG CTGGGAGTAC AGTAATTTAC
  CACTATGCCT GGCTTGGCAA GGTCTTTGAA AAAGGTGCAA ATAACTTAAA CGTCACTATT
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45524852	mCV23140718	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31345186					SNP	G	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:32561774 () rs orientation: forward

Symbol	Name	Function Class
Rr574974	regulatory region 574974	878 bp proximal
Rr574975	regulatory region 574975	1226 bp proximal