rs31343567 SNP Detail

Summary

• ID
  rs31343567
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117094438 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTCATTC ATTAAGAAAA
  AAAAACCACC TTGTATTGCA TTAATTTTCT CATAGTTTTC ATATTTTCTC TGATTTTTCT
  TTATTCTATT CCAATTGTAT CAACCCAAGT TAAAAATAGA ATTACCTTTC TCATTCAAAA
  TTTTTTCAAA GCATATATAC CCCATACAAG ATTTTTTTTA CCACTATTAC CTATGTTAAG
  Y
  TTTTTTCAAG ATGAGTTTGG AAAATGTAAT TAAATTAGGC AAATGCATTA CTTTTAACAC
  CACTGTTGTG AGTTCACCTT ACCTGGAGGC TGTACTCTAG CCTAGAAGTT TTTTTTTTTT
  CCATTGCCAC CTGAGTTCCC ATGGAAACCA GCCTCTTGGC ACACACACAC TCTCTCTCTT
  TTCACTTTAG ATACAGGTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss45524827	mCV25192580	ABI	CRAMUS_MOUSE	f	SNP	C	T	T
ss135687789	ENSMUSSNP1853744	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs31343567					SNP	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117094438 () rs orientation: forward

Symbol	Name	Function Class
Rr583839	regulatory region 583839	106 bp proximal