rs31340756 SNP Detail

Summary

• ID
  rs31340756
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:153663606 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCCT TCTTCCCCCC CCCCCCCCGA
  Y
  CCCCCAAGGG ACTTTCAGAA ACATA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45524346	mCV23501192	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss321031955	CHEV_3_153620933	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31340756					SNP	C	T	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:153663606 () rs orientation: forward

Symbol	Name	Function Class
Gm64825	predicted gene, 64825	1929 bp upstream
Rr398135	regulatory region 398135	19 bp upstream
Rr587804	regulatory region 587804	1439 bp proximal
Rr587805	regulatory region 587805	1616 bp proximal
Rr587806	regulatory region 587806	1940 bp proximal
Tssr32440	transcription start site region 32440	428 bp upstream