rs31337699 SNP Detail

Summary

• ID
  rs31337699
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:132405731 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAAGTGTAA GGAAAGTGCA TGGGATCTCA TTAATGGGAC
  TTTAACAATT ACAGCTGCTC TGTCCATACT CACCTTGTCT GTGGCTTTAA CCTGGTTCAC
  S
  TTCCTGTCTT CACCAGACTG CACATGTTTG GCATCTTTGG GCTCCTCTTT CAGCTCTAAA
  CTTGCTGTGT CTGTAAGTCT GGCTAAATGG CAGTGAGTG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45523260	mCV22641088	ABI	CRAMUS_MOUSE	f	SNP	C	C	G
ss135913830	ENSMUSSNP1016784	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs31337699					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:132405731 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr585446	regulatory region 585446			1489 bp proximal
Tbck	TBC1 domain containing kinase			Intron
				Noncoding-Transcript-Variant