rs31335925 SNP Detail

Summary

• ID
  rs31335925
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58392813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AAGGAGGACA TGGTCAGGCA TTGAGGGGTG ACAGGAGAGA AGCCCAGAGG GCCAGGACAA
  TAAATGGAAA TTAGTAGCCT GGGGGGGGGG GGAAGAGGTC CTCTAGAAAG TACTAGAGTT
  CCAGGAAACT CAAAGAGCCC ACTTCCAGTA GATAGACAGG ACCTCAAGTG GAGGGACTGG
  GTTACCAACC CACAGTCAAA TTTCTGACCC AGAGTTGTTC CTGTTTAAAA GAACTGCAGG
  GACAAAAATG GAGACCAAAG GAAAGGCAGC CCAATGACTG GCTCAACTTG GGATGTCCAC
  R
  TCATGGGGAG GCACCAAGGA CTGACACTAT TACTGATGCT ATGATGTGCT TAGAGATGGG
  AGCCTGGCAT GGCTGTTCTC TGAGAGGCCC TATCAGCAGC TGACTGAGAC AGATGCAGAT
  GCTTACACCC AACCATTGGG CTGAAGTTGG GGACCCCTGT GGTTGAATTA GGTGAAGGAC
  TGAAGAAGCT GAAGGGGAGG GCAACCCCAT AGGAAGACCC CAGGGAGCTC CCAGAGACTA
  AGCCACCAAC CAAGAGCATA CACAGACCAG GCCCCAGAGA AGTGGGAGGC CCTACGGGGA
                                                                   
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45522577	mCV24483793	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss135206577	ENSMUSSNP2519077	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs31335925					SNP	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58392813 () rs orientation: forward

Symbol	Name	Function Class
Rr577231	regulatory region 577231	589 bp proximal
Rr577232	regulatory region 577232	675 bp proximal
Rr577233	regulatory region 577233	1936 bp proximal