rs31328876 SNP Detail

Summary

• ID
  rs31328876
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:126070877 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATTCATGGA AAAGATGTCC CAGTTCAATT TCCACAATTA
  GTAAAAATAT ACTGCAAAGT TTGTAAGCAA TTTATTTACT TTTTATTTTA AGTGTATGGA
  W
  GTTTTGCTAG CATGCATGTT TGTGTACCAT GTGTGTCCTT GGTGCTGTCA AGACCAAAAG
  ATGCTATCAG ATTTTTCTGA TAATTGTGAG CTGCAGCTG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45522498	mCV23909526	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A	T
ss135827572	ENSMUSSNP476757	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
ss320943744	CHEV_3_125980146	CHEVERUD	SCREENING_POP	f	SNP						A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31328876					SNP	T	T	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:126070877 () rs orientation: forward

Symbol	Name	Function Class
Gm18916	predicted gene, 18916	802 bp upstream
Rr584628	regulatory region 584628	586 bp distal
Rr584629	regulatory region 584629	1627 bp proximal