rs31326896 SNP Detail

Summary

• ID
  rs31326896
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:30241595 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TACAAGTAAA TAATTCCAAT TCATCCATCA AAAGGCTCAT
  ACAAGGATAC AGCTTGTGTC TGGGGAAAGG GGTTAACAAT TCTCCAGGAA GAACAAATAA
  Y
  AGCATGAAGC GAGCCTGAAA CCTGAGGACA CAGGGTTATT GATACTCATG CATACGCTTC
  ACAACTGCTA ACTAACGGAG GAAGTGCTAC TGCCCCATC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss45521988	mCV23030779	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss134729724	ENSMUSSNP6810459	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs31326896					SNP	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:30241595 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mecom	MDS1 and EVI1 complex locus			Intron
				Noncoding-Transcript-Variant
Rr574734	regulatory region 574734			577 bp proximal