rs31310944 SNP Detail

Summary

• ID
  rs31310944
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:159270901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAG GACTCTTAGA TACTGCTTGT
  K
  TGTCTGTCAG CTTTCTGGAA GACAA                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss45079512	mCV23471918	ABI	CRAMUS_MOUSE	f	SNP	G	T				T
ss49725330	NES13055686	PERLEGEN	MM_PANEL2	f	SNP			G	T	T		G	T	G	T
ss145864167	ENSMUSSNP4599701	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs31310944					SNP	G	T	G	T	T	T	G	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49725330	NES13055686	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:159270901 () rs orientation: forward

Symbol	Name	Function Class
Rr421534	regulatory region 421534	831 bp proximal