rs31301344 SNP Detail

Summary

• ID
  rs31301344
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:70705411 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTCT GTTTAATGAA TTCAAAATCC
  R
  CTCATGATCC CGCAAGTGAA AGGAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss46509324	mCV25100216	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss325895706	CHEV_X_68914980	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs31301344					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:70705411 () rs orientation: forward

Symbol	Name	Function Class
Gpr50	G-protein-coupled receptor 50	1862 bp upstream
Rr691799	regulatory region 691799	within coordinates
Rr691800	regulatory region 691800	1680 bp proximal
Tssr161172	transcription start site region 161172	1860 bp upstream