rs31297225 SNP Detail

Summary

• ID
  rs31297225
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:33972718 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGGTGCAC AGCAAAATCC
  AGGTAGTATA TAGGTTCTCA ACTGGGATGC AAAGTTAGTG CCTGACTACT GACCCAGTGA
  CTAGTCCAGG TGCCACCAGG CACTCAAAGA TAGGAGGTCC AGGCAGGAGA TGTCGCACAG
  TTGGTAGAGT GGTTGCCTAA CGTGTACAGA GAACCCCGGG CTGCTTAAGG CAGGTGAGAT
  R
  GTGTACTTCT AAAGTCTCAC CACTTGGAAG GTAGAGGCAG AGGAGCAAAG GTCATCCTTA
  GCGACAGTGA GTTTGATGTT AGCCTAGACT ACATGAGACC CAATTCCAAA AAAAAAAAAA
  AAAAATACTA TGTCTTTTTA AACTTAAGAT TTCATAGCAG TTATTATTTT GCTATAACAT
  TATCAAAAAG CCGATTGAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45519865	mCV24296009	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
ss134760327	ENSMUSSNP5638153	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs31297225					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33972718 () rs orientation: forward

Symbol	Name	Function Class
Rr575083	regulatory region 575083	61 bp distal
Rr575084	regulatory region 575084	270 bp proximal
Rr575085	regulatory region 575085	386 bp proximal