rs31295733 SNP Detail

Summary

• ID
  rs31295733
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147976883 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACCAGTA GCCGGTTTAT
  GCAGTGTTTT AATTGTTTAT TTTATTAAAC CACATAGAAC AGGCTATACT GCCTTTTCAT
  TATTATAAAC TAAAGTTATG GTGACTCAGG AATATTTCAT AGAGGGAAAT GAGATGTAAT
  GAGACCTCTC TTCCAAATTC AATGTTTTTG GTAAAAGTGG CCTGAAACAT TTCATTTACC
  R
  ACTGAAAATA TACAAAGTTT CTATTAAAAT TATACTTGTT GATAGGTTAA TTACTAACGA
  TCAGTATCAA TAAGTCTTAG GCAATTTTGT CCCTTGGGCA TTCTCTTAAG ATGGATGGAA
  GAAAATTAGC CCATTCAGTG GTGACTTGGT TAATAACCAG TTTGTTCAAC TTTCCTTTGC
  TTTCTGTCCC TGTCGGCGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss45535859	mCV22801857	ABI	CRAMUS_MOUSE	f	SNP		G	A			A		A
ss47037269	NES10847995	PERLEGEN	MM_PANEL2	f	SNP	G		A	A	A		A	A	A	A		A	A	A		A
ss136057866	ENSMUSSNP3059108	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A					A
ss321014827	CHEV_3_147934211	CHEVERUD	SCREENING_POP	f	SNP											A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs31295733					SNP	G	G	A	A	A	A	A	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47037269	NES10847995	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147976883 () rs orientation: forward

Symbol	Name	Function Class
Rr587183	regulatory region 587183	709 bp proximal
Rr587184	regulatory region 587184	1323 bp proximal