rs31293341 SNP Detail

Summary

• ID
  rs31293341
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:84044495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CACCTTGGGT GCAGAATCAG CCCTATGGTT AATGACTGTC
  ACAGAGAAAG GGAACAGACA ACAAAGACAG GAAGAAGGAC ACTGGCAGAT GGCACCAAGA
  R
  TAGGAATCAG GCACACACTG CTGGCAGCCT GCGGATCCTA GGACAGAAGG AAAGCATTCT
  TCCTCAGGAT CCCAGGGAGC CAGCGCTGTA GCTGGTCTT                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45519077	mCV24157269	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	A
ss135420916	ENSMUSSNP1779728	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss320822425	CHEV_3_83941110	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31293341					SNP	A	A	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:84044495 () rs orientation: forward

Symbol	Name	Function Class
Mnd1	meiotic nuclear divisions 1	Intron
Rr578991	regulatory region 578991	1152 bp distal
Rr578992	regulatory region 578992	382 bp distal
Rr578993	regulatory region 578993	1367 bp proximal