rs31290713 SNP Detail

Summary

• ID
  rs31290713
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:58602291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGC TGGAACCTGC TCCAGAGCTC
  K
  TATCTTATCT GACTCCTACT TTGCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C57BL/6J	DBA/2J	LG/J	SM/J
ss45519445	mCV23124003	ABI	CRAMUS_MOUSE	f	SNP	G	T
ss135208191	ENSMUSSNP4033217	ENSEMBL	ENSEMBL_Sanger	f	SNP		T
ss320783429	CHEV_3_58498792	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	C57BL/6J	DBA/2J	LG/J	SM/J
rs31290713					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:58602291 () rs orientation: forward

Symbol	Name	Function Class
4930593A02Rik	RIKEN cDNA 4930593A02 gene	within coordinates
Cpgi13206	CpG island 13206	1952 bp distal
Rr577271	regulatory region 577271	1503 bp distal