rs31290626 SNP Detail

Summary

• ID
  rs31290626
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83975676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTTCC AAAGAACAAA CATTGCATGA
  Y
  GCCATTTAAT ATGGAAGGAA CTTAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45519130	mCV24158916	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
ss135420253	ENSMUSSNP6389105	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		C
ss320822192	CHEV_3_83872291	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31290626					SNP	C	C	T	C	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83975676 () rs orientation: forward

Symbol	Name	Function Class
Gm56775	predicted gene, 56775	within coordinates
Rr397735	regulatory region 397735	808 bp upstream
Rr578974	regulatory region 578974	786 bp proximal
Rr578975	regulatory region 578975	1072 bp proximal