rs31289456 SNP Detail

Summary

• ID
  rs31289456
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:6082901 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATATCTGAT TCGAGTTTGT
  CCTTCCTGTA ATCCCAGTTG AGTCACAACT TCTCAGAGTC CAGCTTTCTT TGTGATCCTG
  TGATCTGAGA TCCTGTGATG CAGAGATTCT GGGTGTGTCA GAGTTCATGG CAGTCAAGCT
  TCCTCTGAGA CCCTGAGATT CTTGTGTTAC CAAGCTCCTG GGATTCTGGG ATACTGGGAT
  M
  CTGGGACCCT GGGATCCTGG GCATATTTGA GTGTCTGGAA GTGGTACCTC CTCTGGGGGC
  TGTGGGGCTA TCCGCTGAGT TCAAAACCAA CGTAGACCAG TGCAGACCAG AAGGAACCTG
  AGCCACTAGT TGGGCAGGTT TCCTGTGTCA AGCTCCAGAT AGCCCCAGGC ACCCCTGGTT
  CTATTAGAAC AGAGGTTTTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
ss45518246	mCV25456651	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss134546121	ENSMUSSNP1632925	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J
rs31289456					SNP	A	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:6082901 () rs orientation: forward

Symbol	Name	Function Class
Rr573206	regulatory region 573206	985 bp proximal