rs31288518 SNP Detail

Summary

• ID
  rs31288518
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:124067295 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGCTGACT GCCCTTCACT
  CCTGATATAA AAACGGAAAT TGAAGAAATG TTGAATTTTT CTATTGAAAT AACAAAACAA
  AGAGAAATTA TTATTTTGAC ATTTGAGCCT GAGCCAAACC ATTTACCTTT CTCCTCATAT
  TCTTTTCTGT TTATATATAA ATTCTAAAAA CTGATGTGCT GTAGTGAATA TTGGGAAAAT
  M
  AAAACAAGAC TGTACAGAGA ATAAGGTGGA ATATCTGTGA TTTTTTTATT ATTACTATTA
  TTTAGTTTAT TATATAATTA GCCACTACTC TTTCCTTTCA TCCCTCTAAA CTTTCCATAT
  AACCTTCCTT GCTCCCTCTC AATTGCATGG TGTCTTTTAA AGTTAACATA TATATATATA
  TATATATATA TATATATATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45518816	mCV24048937	ABI	CRAMUS_MOUSE	f	SNP	C	A	C
ss135783756	ENSMUSSNP2900630	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss320926844	CHEV_3_123976564	CHEVERUD	SCREENING_POP	f	SNP				C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs31288518					SNP	C	A	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:124067295 () rs orientation: forward

Symbol	Name	Function Class
Gm43731	predicted gene 43731	within coordinates
Rr584584	regulatory region 584584	286 bp distal
Rr584585	regulatory region 584585	1249 bp proximal