rs31287643 SNP Detail

Summary

• ID
  rs31287643
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60668639 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGC TCTACCCTAT ATTTTACAAG
  Y
  TAAGGTGGGG AGAAGTTTCA CAAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45519406	mCV25046576	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T
ss320787124	CHEV_3_60565140	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31287643					SNP	C	T	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60668639 () rs orientation: forward

Symbol	Name	Function Class
Gm37035	predicted gene, 37035	within coordinates
Rr577451	regulatory region 577451	1687 bp proximal
Rr577452	regulatory region 577452	1850 bp proximal