rs31276619 SNP Detail

Summary

• ID
  rs31276619
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:14946620 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTG TCGGATTTTA TGAGAATAGT
  W
  GATGATAAAA ATCTCATAGA TTGTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45516503	mCV23564611	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	T
ss134618258	ENSMUSSNP5807219	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	T		T
ss320667944	CHEV_3_14881560	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs31276619					SNP	A	T	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:14946620 () rs orientation: forward

Symbol	Name	Function Class
Rr397609	regulatory region 397609	1034 bp downstream
Rr573718	regulatory region 573718	1803 bp distal
Rr573719	regulatory region 573719	1490 bp distal
Rr573720	regulatory region 573720	742 bp distal
Rr573721	regulatory region 573721	1238 bp proximal